Genome-wide identification of Drosophila dorso-ventral enhancers by differential histone acetylation analysis
Koenecke N, Johnston J, Gaertner B, Natarajan M, Zeitlinger J. Genome Biol. 2016;17:196.
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Nina Koenecke and Jeffrey Johnston contributed equally to this work.The datasets supporting the conclusions of this article are available in the NCBI Gene Expression
Omnibus repository under accession number GSE68983. In addition, all data analysis performed here,
including raw data, processed data, software tools, and analysis scripts, has been reproduced in a
publicly accessible Linux virtual machine. See the Zeitlinger Lab website's Data page at http://research.stowers.org/zeitlingerlab/data/genome-wide.html for details. The following publicly available datasets were analyzed in the current study: DI/Twi?Sna regions [19] obtained from http://younglab.wi.mit.edu/dorsal/Dorsal_network_targets.txt, modENCODE
cold/warm/hot transcription factor binding regions Dataset S8 [71] obtained from
