Publications
Publications
Supporting the scientific spirit of transparency, the Stowers Institute for Medical Research makes the data underlying its scientific publications freely accessible to the scientific community. Access to original, unprocessed data allows other scientists to validate and extend findings made by Stowers researchers.
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Sugar assimilation underlying dietary evolution of Neotropical bats
Camacho J, Bernal-Rivera A, Pena V, Morales-Sosa P, Robb SMC, Russell J, Yi K, Wang Y, Tsuchiya D, Murillo-Garcia OE, Rohner N. [published ahead of print August 28 2024]. Nat Ecol Evol. 2024.
Isthmus progenitor cells contribute to homeostatic cellular turnover and support regeneration following intestinal injury
Malagola E, Vasciaveo A, Ochiai Y, Kim W, Zheng B, Zanella L, Wang ALE, Middelhoff M, Nienhuser H, Deng L, Wu F, Waterbury QT, Belin B, LaBella J, Zamechek LB, Wong MH, Li L, Guha C, Cheng CW, Yan KS, Califano A, Wang TC. Cell. 2024;187:3056-3071 e3017.
The deubiquitinase Usp7 in Drosophila melanogaster is required for synaptonemal complex maintenance
Lake CM, Gardner J, Briggs S, Yu Z, McKown G, Hawley RS. Proc Natl Acad Sci U S A. 2024;121:e2409346121.
Plasticity of the mitotic spindle in response to karyotype variation
Kunchala P, Varberg JM, O'Toole E, Gardner J, Smith SE, McClain M, Jaspersen SL, Hawley RS, Gerton JL. Curr Biol 2024.
An Integrated Structural Model of the DNA Damage Responsive H3K4me3 Binding WDR76:SPIN1 Complex with the Nucleosome
Liu X, Zhang Y, Wen Z, Hao Y, Banks CAS, Cesare J, Bhattacharya S, Arvindekar S, Lange JJ, Xie Y, Garcia BA, Slaughter BD, Unruh JR, Viswanath S, Florens L, Workman JL, Washburn MP. Proc Natl Acad Sci U S A. 2024;121:e2318601121.
Quartz Crystal Microbalance Frequency Response to Discrete Adsorbates in Liquids
Leshansky AM, Rubinstein BY, Fouxon I, Johannsmann D, Sadowska M, Adamczyk Z. Anal Chem. 2024;96:10559-10568.
Modeling the Evolution of S. pombe Populations with Multiple Killer Meiotic Drivers
Lopez Hernandez JF, Rubinstein BY, Unckless RL, Zanders SE. G3 (Bethesda). 2024:jkae142 doi: 10.1093/g3journal/jkae142.
Identification and characterization of intermediate states in mammalian neural crest cell epithelial to mesenchymal transition and delamination
Zhao R, Moore EL, Gogol MM, Unruh JR, Yu Z, Scott AR, Wang Y, Rajendran NK, Trainor PA. eLife. 2024;13 doi: 10.7554/eLife.92844.
Identification of protein aggregates in the aging vertebrate brainwith prion-like and phase-separation properties
Harel I, Chen YR, Ziv I, Singh PP, Heinzer D, Navarro Negredo P, Goshtchevsky U, Wang W, Astre G, Moses E, McKay A, Machado BE, Hebestreit K, Yin S, Sánchez Alvarado A, Jarosz DF, Brunet A. Cell Rep. 2024:112787 doi: 10.1016/j.celrep.2023.112787.
Post-meiotic mechanism of facultative parthenogenesis in gonochoristic whiptail lizard species
Ho DV, Tormey D, Odell A, Newton AA, Schnittker RR, Baumann DP, Neaves WB, Schroeder MR, Sigauke RF, Barley AJ, Baumann P. eLife. 2024;13 doi: 10.7554/eLife.97035.
Astyanax mexicanus surface and cavefish chromosome-scale assemblies for trait variation discovery
Warren WC, Rice ES, X M, Roback E, Keene A, Martin F, Ogeh D, Haggerty L, Carroll RA, McGaugh S, Rohner N. G3 (Bethesda). 2024:jka3103 doi: 10.1093/g3journal/jkae103.
A PAK family kinase and the Hippo/Yorkie pathway modulate WNT signaling to functionally integrate body axes during regeneration
Doddihal V, Mann FG, Jr., Ross EJ, McKinney MC, Guerrero-Hernandez C, Brewster CE, McKinney SA, Sanchez Alvarado A. Proc Natl Acad Sci U S A. 2024;121:e2321919121.
Zika virus non-coding RNAs antagonize antiviral responses by PKR-mediated translational arrest
Pallares HM, Ledesma MMGL, Rouco SO, Castellano LA, Costa Navarro GS, Fernandez-Alvarez AJ, D'Andreiz MJ, Aidas DV, Alvarez DE, Bazzini A, Gamarnik AV. ZIKV 2024.
Niche Tet maintains germline stem cells independently of dioxygenase activity
Tu R, Ping Z, Liu J, Tsoi ML, Song X, Liu W, Xie T. EMBO J. 2024;43:1570-1590.
Distinct epicardial gene regulatory programs drive development and regeneration of the zebrafish heart
Weinberger M, Simoes FC, Gungoosingh T, Sauka-Spengler T, Riley PR. Dev Cell. 2024;59:351-367 e356.
Host evolution shapes cavefish gut microbiome
Riddle MR, Nguyen NK, Nave M, Peuss R, Maldonado E, Rohner N, Tabin CJ. Ecol Evol. 2024;14:e11192.
The prevalence of copy number increase at multiallelic copy number variants associated with cave colonization
Pokrovac I, Rohner N, Pezer Z. Mol Ecol. 2024;33:e17339.
Graded FGF activity patterns distinct cell types within the apical sensory organ of the sea anemone Nematostella vectensis
Sabin KZ, Chen S, Hill EM, Weaver KJ, Yonke J, Kirkman M, Redwine WB, Klompen AML, Zhao X, Guo F, McKinney MC, Dewey JL, Gibson MC. Dev Biol. 2024;510:50-65.
The Complete Sequence and Comparative Analysis of Ape Sex Chromosomes
Makova KD, Pickett BD, Harris RS, Hartley GA, Cechova M, Pal K, Nurk S, Yoo D, Li Q, Hebbar P, McGrath BC, Antonacci F, Aubel M, Biddanda A, Borchers M, Bornberg-Bauer E, Bouffard GG, Brooks SY, Carbone L, Carrel L, Carroll A, Chang PC, Chin CS, Cook DE, Craig SJC, de Gennaro L, Diekhans M, Dutra A, Garcia GH, Grady PGS, Green RE, Haddad D, Hallast P, Harvey WT, Hickey G, Hillis DA, Hoyt SJ, Jeong H, Kamali K, Pond SLK, LaPolice TM, Lee C, Lewis AP, Loh YE, Masterson P, McGarvey KM, McCoy RC, Medvedev P, Miga KH, Munson KM, Pak E, Paten B, Pinto BJ, Potapova T, Rhie A, Rocha JL, Ryabov F, Ryder OA, Sacco S, Shafin K, Shepelev VA, Slon V, Solar SJ, Storer JM, Sudmant PH, Sweetalana, Sweeten A, Tassia MG, Thibaud-Nissen F, Ventura M, Wilson MA, Young AC, Zeng H, Zhang X, Szpiech ZA, Huber CD, Gerton JL, Yi SV, Schatz MC, Alexandrov IA, Koren S, O'Neill RJ, Eichler EE, Phillippy AM. Nature 2024;630:401-411.
Regulators of rDNA morphology in fission yeast
Cockrell AJ, Lange JJ, Wood C, Mattingly M, McCroskey SM, Bradford WD, Conkright-Fincham J, Weems L, Guo MS, Gerton JL. PLoS Genet. 2024;20:e1011331.
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The Stacking Cell Puzzle
Mir M, Nowotarski S. Patterns. 2024;5:101040.
Deciphering Molecular Orchestrations: XooClp IntegratesEnvironmental Sensing and Virulence Regulation inXanthomonas oryzae pv. oryzae
Sankari S, Lovelace AH. Mol Plant Microbe Interact. 2024;37:355-356.
Tracing embryonic hematopoiesis guides induction of pluripotent stem cells to hematopoietic progenitors
Mao X, Li L. Dev Cell. 2024;59:1093-1095.
Navigating the post-pandemic terrain: lessons in resilience and adaptation
Zhao C, Chiriboga LA, Chlipala EA. J Histotechnol. 2024:1-2.
The SWI/SNF chromatin remodeling complex: a critical regulator of metabolism
Church MC, Workman JL. [published ahead of print April 26 2024]. Biochem Soc Trans. 2024.
From Darkness to Discovery: Evolutionary, Adaptive and Translational Genetic Insights from Cavefish
Swaminathan A, Xia F, Rohner N. Trends Genet. 2024;40:24-38.
A working model for the formation of Robertsonian chromosomes
Gerton JL. J Cell Sci. 2024;137:jcsw261912.
Activity‐dependent formation of the topographic map and the critical period in the development of mammalian olfactory system
Fang A, Yu CR. Genesis. 2024;62:e23586.
Pluripotency of a founding field: rebranding developmental biology
Rodgers CD, Memiya C, Arur S, Babonis L, Barres M, Bartlett M, Behringer RR, Benham-Pyle BW, Bergmann D, Blackman B, Brown CT, Browne B, Camacho J, Chabu CY, Chow I, Cleaver O, Cool J, Dennis MY, Dickenson AJ, Di Talia S, Frank M, Gillmor S, Haag ES, Hariharan IK, Harland R, Husbands A, Jerome-Majewska L, Koenig K, Labonne C, Layden MJ, Lowe C, Mani M, Martick M, McKown K, Moens C, Mosimann C, Onyenedum J, Reed R, Rivera A, rokhsar DS, Royer L, Rutaganiera F, Shahan R, Sinha N, Swalla BJ, Van Norman JM, Wagner DE, Wikramanayaka A, Zebell S, Brady SM. Development. 2024;151:dev202342 doi: 10.1242/dev.202342.
Unraveling Stress Resilience: Insights From Adaptations to Extreme Environments by Astyanax mexicanus Cavefish
Cobham AE, Rohner N. J Exp Zool B Mol Dev Evol. 2024.
Rpd3S meets the nucleosome
Carrozza MJ, Workman JL. Cell Res. 2024;34:1-2.
Dynamic Changes in Ocular Shape During Human Development and its Implications for Retina Fovea Formation
Rasys AM, Wegerski A, Trainor PA, Hufnagel RB, Menke DB, Lauderdale JD. BioEssays. 2024;46:e2300054.
